Mappings for the athena-specimen-profile resource profile.
| AthenaSpecimen |
| Specimen | FHIRR4_SPECIMENVIEW |
| id | MakeId("SPECIMEN",%SPECIMENID%) |
| meta | |
| versionId | MakeId(%RESOURCEID%) |
| lastUpdated | %WHENUPDATED% |
| security | |
| security (SENSITIVECHART) | CheckSensitive(%SENSITIVECHART%) |
| security (CONFABBR) | |
| system | getSiteCodeSystem("ConfidentialDocument") |
| code | %CONFABBR% |
| tag | MakeChangeTagList(%CHANGE%) |
| identifier | MakeIdentifier("U",getSiteSystem("SPECIMENID"),%SPECIMENID%) |
| type | MakeSpecimenTypeCodeableConcept(%SPECIMENSNOMEDCODE%,"http://snomed.info/sct",%SPECIMENDESCRIPTION%,%SPECIMENCODE%,"http://terminology.hl7.org/CodeSystem/v2-0487",%SPECIMENDESCRIPTION%) |
| subject | MakeReference("PATIENTPROFILE",%PID%,"Patient") |
| collection | |
| collected[x] | %WHENCOLLECTED% |
| bodySite | MakeConcept(%BODYSITESNOMEDCODE%,"http://snomed.info/sct",%BODYSITEDESCRIPTION%) |
| AthenaSpecimen |
| Specimen | FHIRR4_SPECIMENVIEW |
| id | MakeId("SPECIMEN",%SPECIMENID%) |
| meta | |
| versionId | MakeId(%RESOURCEID%) |
| lastUpdated | %WHENUPDATED% |
| security | |
| security (SENSITIVECHART) | CheckSensitive(%SENSITIVECHART%) |
| security (CONFABBR) | |
| system | getSiteCodeSystem("ConfidentialDocument") |
| code | %CONFABBR% |
| tag | MakeChangeTagList(%CHANGE%) |
| identifier | MakeIdentifier("U",getSiteSystem("SPECIMENID"),%SPECIMENID%) |
| type | MakeSpecimenTypeCodeableConcept(%SPECIMENSNOMEDCODE%,"http://snomed.info/sct",%SPECIMENDESCRIPTION%,%SPECIMENCODE%,"http://terminology.hl7.org/CodeSystem/v2-0487",%SPECIMENDESCRIPTION%) |
| subject | MakeReference("PERSON",%PID%,"Patient") |
| collection | |
| collected[x] | %WHENCOLLECTED% |
| bodySite | MakeConcept(%BODYSITESNOMEDCODE%,"http://snomed.info/sct",%BODYSITEDESCRIPTION%) |
| AthenaSpecimen |
| Specimen | Entity. Role, or Act, Role[classCode=SPEC] |
| meta | |
| id | n/a |
| extension | n/a |
| security | |
| security (SENSITIVECHART) | |
| security (CONFABBR) | |
| id | n/a |
| extension | n/a |
| system | ./codeSystem |
| version | ./codeSystemVersion |
| code | ./code |
| display | CV.displayName |
| userSelected | CD.codingRationale |
| text | Act.text? |
| contained | N/A |
| extension | N/A |
| modifierExtension | N/A |
| identifier | .id |
| accessionIdentifier | .participation[typeCode=SBJ].act[classCode=ACSN, moodCode=EVN].id |
| status | status |
| type | .code |
| subject | .scoper or .scoper.playsRole |
| receivedTime | .participation[typeCode=SBJ].act[code=SPCREC, moodCode=EVN].effectiveTime |
| parent | .scoper (if parent) .player.scopesRole[classCode=SPEC].player (if child) |
| request | outboundRelationship[typeCode=FLFS].target |
| collection | .participation[typeCode=SBJ].act[classCode=SPECCOLLECT, moodCode=EVN] |
| id | n/a |
| extension | n/a |
| modifierExtension | N/A |
| collector | .participation[typeCode=PFM].role |
| collected[x] | .effectiveTime |
| quantity | .participation[typeCode=SBJ].role[classCode=SPEC].player.quantity |
| method | .methodCode |
| bodySite | .targetSiteCode |
| processing | .participation[typeCode=SBJ].act[code=SPCTRT, moodCode=EVN] |
| id | n/a |
| extension | n/a |
| modifierExtension | N/A |
| description | .text |
| procedure | .code |
| additive | .participation[typeCode=CSM].role[classCode=ADTV].code |
| time[x] | .effectiveTime |
| container | .player.scopingRole[classCode=CONT].scoper |
| id | n/a |
| extension | n/a |
| modifierExtension | N/A |
| identifier | .id |
| description | .desc |
| type | .code |
| capacity | .quantity |
| specimenQuantity | .playedRole[classCode=CONT].quantity |
| additive[x] | .scopesRole[classCode=ADTV].player |
| note | .inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code="annotation"].value |